Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs10484399 chr6:27534528 A/G 1.21E-8 289 25.58 28.68 9.77 KM Plot
KIRP rs10488763 chr11:110244360 A/T 0.000124 288 26.37 20.4 17.13 KM Plot
KIRP rs10501621 chr11:86156797 T/C 3.37E-5 285 26.48 20.67 10.7 KM Plot
KIRP rs10509649 chr10:94768166 A/T 1.03E-9 289 25.6 27.05 9 KM Plot
KIRP rs10510867 chr3:61712041 C/T 7.45E-6 281 26.6 26.2 18.87 KM Plot
KIRP rs10545184 chr3:42957341 CCTT/C 2.58E-5 288 26.28 22.9 21.17 KM Plot
KIRP rs10627852 chr17:30267187 A/ATATT 1.45E-12 278 26.63 24.67 10.37 KM Plot
KIRP rs10631016 chr5:156468499 A/ACT 1.99E-6 285 12.78 22.47 26.63 KM Plot
KIRP rs10676754 chr11:86188403 G/GAAT 0.000113 286 10.7 22.1 26.37 KM Plot
KIRP rs10682852 chr10:43473797 C/CTGT 2.57E-5 287 25.67 26.52 11.43 KM Plot
KIRP rs10690959 chr10:5150671 C/CAT 8.96E-7 286 18.9 26.82 25.58 KM Plot
KIRP rs10710383 chr2:100943808 AT/A 1.91E-5 288 23.4 25.82 25.63 KM Plot
KIRP rs1071928 chr16:51416730 C/T 1.47E-11 289 26.2 21.37 9 KM Plot
KIRP rs10748406 chr12:45330612 A/C 0.000102 289 20.27 28.17 24.67 KM Plot
KIRP rs10775286 chr16:8710285 G/A 5.74E-5 288 5.72 34.3 25.5 KM Plot